Janna Hastings: search on Z-Library

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1

Interdisciplinary perspectives on the development, integration, and application of cognitive ontologies

Hastings, Janna, Frishkoff, Gwen A., Smith, Barry, Jensen, Mark, Poldrack, Russell A., Lomax, Jane, Bandrowski, Anita, Imam, Fahim, Turner, Jessica A., Martone, Maryann E.

Journal:

Frontiers in Neuroinformatics

Year:

2014

Language:

english

File:

PDF, 527 KB

english, 2014

2

Application of Domain Ontologies to Natural Language Processing

Herrero-Zazo, María, Segura-Bedmar, Isabel, Hastings, Janna, Martínez, Paloma

Journal:

International Journal of Information Retrieval Research

Year:

2015

Language:

english

File:

PDF, 505 KB

english, 2015

3

[International Review of Neurobiology] Bioinformatics of Behavior: Part 1 Volume 103 || Ontologies for Human Behavior Analysis and Their Application to Clinical Data

Hastings, Janna

Year:

2012

Language:

english

File:

PDF, 587 KB

english, 2012

4

PubChemRDF: towards the semantic annotation of PubChem compound and substance databases

Fu, Gang, Batchelor, Colin, Dumontier, Michel, Hastings, Janna, Willighagen, Egon, Bolton, Evan

Journal:

Journal of Cheminformatics

Year:

2015

Language:

english

File:

PDF, 1.69 MB

english, 2015

5

Three Hybrid Classifiers for the Detection of Emotions in Suicide Notes

Liakata, Maria, Kim, Jee-Hyub, Saha, Shyamasree, Hastings, Janna, Rebholz-Schuhmann, Dietrich

Journal:

Biomedical Informatics Insights

Year:

2012

Language:

english

File:

PDF, 535 KB

english, 2012

6

From Affective Science to Psychiatric Disorder: Ontology as a Semantic Bridge

Larsen, Rasmus Rosenberg, Hastings, Janna

Journal:

Frontiers in Psychiatry

Year:

2018

Language:

english

File:

PDF, 1.91 MB

english, 2018

7

Harmonising and linking biomedical and clinical data across disparate data archives to enable integrative cross-biobank research

Spjuth, Ola, Krestyaninova, Maria, Hastings, Janna, Shen, Huei-Yi, Heikkinen, Jani, Waldenberger, Melanie, Langhammer, Arnulf, Ladenvall, Claes, Esko, Tõnu, Persson, Mats-Åke, Heggland, Jon, Dietrich,

Journal:

European Journal of Human Genetics

Year:

2015

Language:

english

File:

PDF, 616 KB

english, 2015

8

Chemical ontologies: what are they, what are they for and what are the challenges

Janna Hastings, Nico Adams, Marcus Ennis, Duncan Hull, Christoph Steinbeck

Journal:

Journal of Cheminformatics

Year:

2011

Language:

english

File:

PDF, 161 KB

english, 2011

9

FMCS: a novel algorithm for the multiple MCS problem

Andrew Dalke, Janna Hastings

Journal:

Journal of Cheminformatics

Year:

2013

Language:

english

File:

PDF, 61 KB

english, 2013

10

ChEBI: a chemistry ontology and database

Paula de Matos, A Dekker, M Ennis, Janna Hastings, K Haug, S Turner, Christoph Steinbeck

Journal:

Journal of Cheminformatics

Year:

2010

Language:

english

File:

PDF, 149 KB

english, 2010

11

Process attributes in bio-ontologies

André Q Andrade, Ward Blondé, Janna Hastings, Stefan Schulz

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 380 KB

english, 2012

12

Towards automatic classification within the ChEBI ontology

Hastings, Janna, de Matos, Paula, Ennis, Marcus, Steinbeck, Christoph

Journal:

Bioentrepreneur

Year:

2009

Language:

english

File:

PDF, 618 KB

english, 2009

13

ChEBI in 2016: Improved services and an expanding collection of metabolites

Hastings, Janna, Owen, Gareth, Dekker, Adriano, Ennis, Marcus, Kale, Namrata, Muthukrishnan, Venkatesh, Turner, Steve, Swainston, Neil, Mendes, Pedro, Steinbeck, Christoph

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 2.85 MB

english, 2016

14

Application of Domain Ontologies to Natural Language Processing

Herrero-Zazo, María, Segura-Bedmar, Isabel, Hastings, Janna, Martínez, Paloma

Journal:

International Journal of Information Retrieval Research

Year:

2015

File:

PDF, 505 KB

2015

15

libChEBI: an API for accessing the ChEBI database

Swainston, Neil, Hastings, Janna, Dekker, Adriano, Muthukrishnan, Venkatesh, May, John, Steinbeck, Christoph, Mendes, Pedro

Journal:

Journal of Cheminformatics

Year:

2016

Language:

english

File:

PDF, 1.73 MB

english, 2016

16

Structure-based classification and ontology in chemistry

Hastings, Janna, Magka, Despoina, Batchelor, Colin, Duan, Lian, Stevens, Robert, Ennis, Marcus, Steinbeck, Christoph

Journal:

Journal of Cheminformatics

Year:

2012

Language:

english

File:

PDF, 385 KB

english, 2012

17

ChEBI – an Open-access Chemistry Resource for the Life Sciences:*Facilities for On-line Submission and Curation

Hull, Duncan, Josephs, Zara, Owen, Gareth, Turner, Steve, Ennis, Marcus, Adams, Nico, Dekker, Adriano, de Matos, Paula, Hastings, Janna, Steinbeck, Christoph, Haug, Kenneth

Journal:

Bioentrepreneur

Year:

2010

Language:

english

File:

PDF, 480 KB

english, 2010

18

Ten recommendations for software engineering in research

Hastings, Janna, Haug, Kenneth, Steinbeck, Christoph

Journal:

Year:

2014

Language:

english

File:

PDF, 688 KB

english, 2014

19

Structured chemical class definitions and automated matching for chemical ontology evolution

Lian Duan, Janna Hastings, Paula de Matos, Marcus Ennis, Christoph Steinbeck

Journal:

Journal of Cheminformatics

Year:

2012

Language:

english

File:

PDF, 71 KB

english, 2012

20

Towards automatic classification within the ChEBI ontology

Hastings, Janna, de Matos, Paula, Ennis, Marcus, Steinbeck, Christoph

Journal:

Bioentrepreneur

Year:

2009

File:

PDF, 618 KB

2009

21

BiNChE: A web tool and library for chemical enrichment analysis based on the ChEBI ontology

Moreno, Pablo, Beisken, Stephan, Harsha, Bhavana, Muthukrishnan, Venkatesh, Tudose, Ilinca, Dekker, Adriano, Dornfeldt, Stefanie, Taruttis, Franziska, Grosse, Ivo, Hastings, Janna, Neumann, Steffen, S

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 784 KB

english, 2015

22

Evaluating the Emotion Ontology through use in the self-reporting of emotional responses at an academic conference

Hastings, Janna, Brass, Andy, Caine, Colin, Jay, Caroline, Stevens, Robert

Journal:

Journal of Biomedical Semantics

Year:

2014

Language:

english

File:

PDF, 1.26 MB

english, 2014

23

ClassyFire: automated chemical classification with a comprehensive, computable taxonomy

Djoumbou Feunang, Yannick, Eisner, Roman, Knox, Craig, Chepelev, Leonid, Hastings, Janna, Owen, Gareth, Fahy, Eoin, Steinbeck, Christoph, Subramanian, Shankar, Bolton, Evan, Greiner, Russell, Wishart,

Journal:

Journal of Cheminformatics

Year:

2016

Language:

english

File:

PDF, 3.51 MB

english, 2016

24

[IEEE 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Belfast, United Kingdom (2014.11.2-2014.11.5)] 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - The first eNanoMapper prototype: A substance database to support safe-by-design

Jeliazkova, Nina, Doganis, Philip, Fadeel, Bengt, Grafstrom, Roland, Hastings, Janna, Jeliazkov, Vedrin, Kohonen, Pekka, Munteanu, Cristian R., Sarimveis, Haralambos, Smeets, Bart, Tsiliki, Georgia, V

Year:

2014

Language:

english

File:

PDF, 441 KB

english, 2014

25

Data standards can boost metabolomics research, and if there is a will, there is a way

Rocca-Serra, Philippe, Salek, Reza M., Arita, Masanori, Correa, Elon, Dayalan, Saravanan, Gonzalez-Beltran, Alejandra, Ebbels, Tim, Goodacre, Royston, Hastings, Janna, Haug, Kenneth, Koulman, Albert,

Journal:

Year:

2016

Language:

english

File:

PDF, 1.15 MB

english, 2016

26

The eNanoMapper database for nanomaterial safety information

Jeliazkova, Nina, Chomenidis, Charalampos, Doganis, Philip, Fadeel, Bengt, Grafström, Roland, Hardy, Barry, Hastings, Janna, Hegi, Markus, Jeliazkov, Vedrin, Kochev, Nikolay, Kohonen, Pekka, Munteanu,

Journal:

Beilstein Journal of Nanotechnology

Year:

2015

Language:

english

File:

PDF, 3.26 MB

english, 2015

27

ChEBI – an Open-access Chemistry Resource for the Life Sciences:*Facilities for On-line Submission and Curation

Hull, Duncan, Josephs, Zara, Owen, Gareth, Turner, Steve, Ennis, Marcus, Adams, Nico, Dekker, Adriano, de Matos, Paula, Hastings, Janna, Steinbeck, Christoph, Haug, Kenneth

Journal:

Bioentrepreneur

Year:

2010

File:

PDF, 480 KB

2010

28

Self-organizing ontology of biochemically relevant small molecules

Leonid L Chepelev, Janna Hastings, Marcus Ennis, Christoph Steinbeck, Michel Dumontier

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 798 KB

english, 2012

29

Cheminformatics

Wegner, Joerg Kurt, Willighagen, Egon, Sterling, Aaron, Guha, Rajarshi, Bender, Andreas, Faulon, Jean-Loup, Hastings, Janna, O'Boyle, Noel, Overington, John, Van Vlijmen, Herman

Journal:

Communications of the ACM

Year:

2012

Language:

english

File:

PDF, 5.38 MB

english, 2012

30

DINTO: Using OWL Ontologies and SWRL Rules to Infer Drug–Drug Interactions and Their Mechanisms

Herrero-Zazo, María, Segura-Bedmar, Isabel, Hastings, Janna, Martínez, Paloma

Journal:

Journal of Chemical Information and Modeling

Year:

2015

Language:

english

File:

PDF, 1.08 MB

english, 2015

31

Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology

Hill, David P, Adams, Nico, Bada, Mike, Batchelor, Colin, Berardini, Tanya Z, Dietze, Heiko, Drabkin, Harold J, Ennis, Marcus, Foulger, Rebecca E, Harris, Midori A, Hastings, Janna, Kale, Namrata S, d

Journal:

Year:

2013

Language:

english

File:

PDF, 410 KB

english, 2013

32

eNanoMapper: harnessing ontologies to enable data integration for nanomaterial risk assessment

Hastings, Janna, Jeliazkova, Nina, Owen, Gareth, Tsiliki, Georgia, Munteanu, Cristian R, Steinbeck, Christoph, Willighagen, Egon

Journal:

Journal of Biomedical Semantics

Year:

2015

Language:

english

File:

PDF, 1.89 MB

english, 2015

33

WormJam: A consensus C. elegans Metabolic Reconstruction and Metabolomics Community and Workshop Series

Hastings, Janna, Mains, Abraham, Artal-Sanz, Marta, Bergmann, Sven, Braeckman, Bart P., Bundy, Jake, Cabreiro, Filipe, Dobson, Paul, Ebert, Paul, Hattwell, Jake, Hefzi, Hooman, Houtkooper, Riekelt H.,

Journal:

Year:

2017

Language:

english

File:

PDF, 1.05 MB

english, 2017

34

Expanding natural product chemistry resources at the EBI

Janna Hastings, Pablo Conesa, Adriano Dekker, Marcus Ennis…

Journal:

Journal of Cheminformatics

Year:

2013

Language:

english

File:

PDF, 70 KB

english, 2013

35

Unintended consequences of existential quantifications in biomedical ontologies

Martin Boeker, Ilinca Tudose, Janna Hastings, Daniel Schober, Stefan Schulz

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 351 KB

english, 2011

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